Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015839976.1_cds_XP_016507465.1_20584
CDS Infomation

[gene=LOC107825148] [db_xref=GeneID:107825148] [protein=vignain-like] [protein_id=XP_016507465.1] [location=complement(join(11717..11974,12412..12552,12649..12881,12962..13403))] [gbkey=CDS]
Sequence

ATGGAGTTGGGGAAGATTTTCTTAATTTCTGTTTTGTTGCCTATGGCATTTGGGCTAGTT
CAGAGCTTAGAGTTCACCGAAAAAGACATAGCATCTGAAGAGAGCTTATGGGATTTGTAC
CAGAGATGGAGGAGCCATCACACTGTTTCTCGAGACCTAAGCGAGAAACAAAAACGTTTC
AATGTATTCAAGGCGAATGTGATGCATGTTCACAAGGTGAACAAGATGGACAGGCCTTAT
AAATTGAAACTCAACGAGTTTGCTGCTATGACCAATCATGAATTCAGAAATTTTTACAGC
TCTAAGGTAAAACACTTTAGAATGCTCCATGGTAGCCGGCCTACTACTGGATTTATGCAC
GACAAGGCTGATAATCTGCCAGCATCCATCGATTGGAGAAAGCAAGGCGCTGTCACTGGT
GTAAAGAATCAAGGCAAATGCGGTAGTTGTTGGGCATTTTCTGCAGTTGTTGGGGTTGAG
GGAATAAACAAAATCAAGACTGGCCAATTAGTTTCCCTGTCTGAACAAGAGCTTGTTGAT
TGTGAAAAGGATAATGAAGGATGCAATGGAGGACTAATGGAAAATGCCTATGAATTCATC
AAGAAAAATGGAGGAATAACAACTGAGGGGATCTATCCTTACAGAGCAAGAGACAGTCGC
TGTGATTCTTCAAAGATGAATTCCCCGGTGGTTAATATCGATGGACACGAAATGGTACCT
ACAAACGACGAGGATGCTTTGATGAAAGCTGTTGCCAACCAACCAGTATCTGTTGCTATT
GATGCTAGTGGTTCCGATCTGCAGTTTTACTCTGAGGGAGTGTTCAATGGAAATTGTGGC
ACAGAGCTAGACCATGGGGTAGCAGTTGTGGGCTATGGAGCAACTCATGATGGAACAAAG
TATTGGATAGTGAAGAACTCATGGGGGACTGGATGGGGAGAACAAGGTTATTTTAGGATG
GAACGAGGCATCGATGCTGGAGAAGGACTGTGTGGCATAGCCATGGAAGCTTCATATCCA
CTCAAATTATCCTCGGACAATCCAAAACCAGCCCCCTCTAAGGATGAACTCTAG

Peptide Sequence

PEP ID

XP_016507465.1
PEP Infomation

PREDICTED: vignain-like [Nicotiana tabacum]
Sequence

MELGKIFLISVLLPMAFGLVQSLEFTEKDIASEESLWDLYQRWRSHHTVSRDLSEKQKRF
NVFKANVMHVHKVNKMDRPYKLKLNEFAAMTNHEFRNFYSSKVKHFRMLHGSRPTTGFMH
DKADNLPASIDWRKQGAVTGVKNQGKCGSCWAFSAVVGVEGINKIKTGQLVSLSEQELVD
CEKDNEGCNGGLMENAYEFIKKNGGITTEGIYPYRARDSRCDSSKMNSPVVNIDGHEMVP
TNDEDALMKAVANQPVSVAIDASGSDLQFYSEGVFNGNCGTELDHGVAVVGYGATHDGTK
YWIVKNSWGTGWGEQGYFRMERGIDAGEGLCGIAMEASYPLKLSSDNPKPAPSKDEL

Transcript Sequence

Gene sequence data has not been registered.